pseudogene predict

shenzy@shenzy-ubuntu:~/Desktop/zhanglei/pgenes/pseudopipe/bin$ ./pseudopipe.sh /home/shenzy/Desktop/zhanglei/pgenes/ppipe_output/prodigal/tcs4/ /home/shenzy/Desktop/zhanglei/pgenes/ppipe_input/prodigal/tcs4/dna/tcs4_genome.fasta.masked /home/shenzy/Desktop/zhanglei/pgenes/ppipe_input/prodigal/tcs4/d[……]

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gff3 to gft method

The easiest way is to use the gffread program that comes with the Cufflinks software suite (Tuxedo) gffread my.gff3 -T -o my.gtf See gffread -h for more information

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Deseq and spktools microarray analysis

DESeq

spkDoc

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Toward more realistic drug–target interaction predictions

Toward more realistic drug–target interaction predictions. […]

5 Popular Web Clipping Software Platforms » Practical Ecommerce

5 Popular Web Clipping Software Platforms » Practical Ecommerce. […]

How to Post Web Clips to a WordPress Blog Directly With a “Press This” Button | eHow

How to Post Web Clips to a Wordpress Blog Directly With a “Press This” Button | eHow. […]

STAMP (Statistical Analysis of Metagenomic Profiles)

STAMP

StampIcon.png

Using STAMP to identify SEED subsystems which are differentially abundant between CandidatusAccumulibacter phosphatis sequences obtained from a pair of enhanced biological phosphorus removal (EBPR) sludge metagenomes(data originally described in Parks and Beiko, 2010).

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