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ll -S -h| grep ‘^[^d]’ -rw-r–r– 1 shenzy shenzy 3.3M 2012-01-18 10:13 Patrick_Lee_lastVersion.rar -rw-r–r– 1 shenzy shenzy 3.2M 2012-01-18 17:50 Patrick_Lee_update.rar -rw-r–r– 1 shenzy shenzy 899K 2011-11-25 18:10 metagenomic_phylogenetic_tree.ppt -rw-r–r– 1 shenzy shenzy 44[……] […] install.packages("BiodiversityR")
library(BiodiversityR) library(vegan) data(dune.env) data(dune) RankAbun.1 <- rankabundance(dune) RankAbun.1 rankabunplot(RankAbun.1,scale='abundance', addit=FALSE, specnames=c(1,2,3)) rankabuncomp(dune, y=dune.env, factor='Management', scale='propo[......] […] # 打印每行，并删除第二列
＃ 打印部分文本
bash-3.2$ # 打印文件的前十行 （模拟 “head”） bash-3.2$ awk ‘NR < 11′ test1 # 打印文件的最后两行 （模拟 “tail -2″） awk ‘{y=x “\n” $0; x=$0};END{print y}’ # 打印文件的最后[……]
[…] Description
Cake is a bioinformatics tool to identify putative somatic mutations from cancer genome/exome data. Cake combines somatic calls from a number of publicly available SNP/somatic variant calling tools with an array of variant filtering modules to discard unwanted  [……] […] Align.check 这个命令使你计算16S rRNA基因序列中潜在的错配碱基对数目。如果你对ARB(http://www.arb-home.de/)的编辑窗口熟悉的话，这与计算~，#，-和=这些符号的数目相同。用greengenes的二级结构图谱和esophagus dataset运行这个命令。要运行这个命令，你必须提供FASTA格式的序列文件。 Align.seqs 这个命令把用户提供的FASTA格式的候选序列文件对齐到用户提供的同样格式的模板序列。通用的方法是： 1.采用kmer searching（http://sourceforge.net/apps/mediawiki/k[……] […] |
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