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MetaVelvet: a short read assember for metagenomics Introduction Motivation: An important step of “metagenomics” analysis is the assembly of multiple genomes from mixed sequence reads of multiple species in a microbial community. Most conventional pipelines employ a single-genome assembler with carefully optimized parameters and post-process the resulting scaffolds to correct assembly errors. Limitations of the […] http://www.r-phylo.org/wiki/HowTo/InputtingTrees The commands referenced below are all part of special phylogenetic packages in R, not the basic R install. Be sure that you have installed and loaded the packages containing the commands referenced below before continuing. For example: library(ape) This loads the package ape and its required packages, gee, nlme and lattice, into your R […] 1. zcat 可以使用zcat查看gzip压缩后的文件中的内容, 包括tar zcvf命令压缩后的文件 2. tar 可以使用tar -tvf查看tar包中包含的文件 3. zgrep 可以使用zgrep在压缩文件中进行内容搜索, 注：只能查看 .gz 文件． |
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