Contents
Workflows:
Processing 16S rRNA data using a unsupervised method
Processing 16S rRNA data using a supervised method
Processing functional gene data using a supervised method
Individual tools:
Using the Pipeline Initial Process
Align 16S rRNA sequences using Infernal Aligner
Performing Complete Linkage Clustering
–Using the .clust File Results (for abundance stats, diversity stats, OTU matrix or rarefaction)
Performing statistical analysis (coming soon)
Align protein using HMMER3 Aligner
Frameshift-correction and closest match assignment by RDP FrameBot
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