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Our project TaxCollector has been published in MPDI Diversity. Abstract The high level of conservation of 16S ribosomal RNA gene (16S rRNA) in all Prokaryotes makes this gene an ideal tool for the rapid identification and classification of these microorganisms. Databases such as the Ribosomal Database Project II (RDP-II) and the Greengenes Project offer access […] http://www.bioconductor.org/packages/release/bioc/html/mcaGUI.html mcaGUI Microbial Community Analysis GUI Bioconductor version: Release (2.10) Microbial community analysis GUI for R using gWidgets. Author: Wade K. Copeland, Vandhana Krishnan, Daniel Beck, Matt Settles, James Foster, Kyu-Chul Cho, Mitch Day, Roxana Hickey, Ursel M.E. Schutte, Xia Zhou, Chris Williams, Larry J. Forney, Zaid Abdo, Poor Man’s GUI (PMG) base code by […] Abstract Motivation: RNA-seq has been extensively used for transcriptome study. Quality control (QC) is critical to ensure that RNA-seq data are of high quality and suitable for subsequent analyses. However, QC is a time-consuming and complex task, due to the massive size and versatile nature of RNA-seq data. Therefore, a convenient and comprehensive QC […] http://www.biocontext.org/ Motivation: Although the amount of data in biology is rapidly increasing, critical information for understanding biological events like phosphorylation or gene expression remains locked in the biomedical literature. Most current text mining (TM) approaches to extract information about biological events are focused on either limited-scale studies and/or abstracts, with data extracted lacking context […] The following list of reasons to do a Ph.D. or postdoc in bioinformatics or computational biology appeared on Casey Bergman’s blog. 0. Computing is the key skill set for 21st century biology 1. Computational skills are highly transferrable 2. Computing will help improve your core scientific skills 3. You should use you Ph.D./Post-Doc to develop […] 按Ctrl+ALT+T 快捷键打开终端， 输入： killall ibus-daemon （结束进程） ibus-daemon -d （重启ibus） ————————————————————————- SED单行脚本快速参考（Unix 流编辑器） 2005年12月29日 英文标题：USEFUL ONE-LINE SCRIPTS FOR SED (Unix stream editor) 原标题：HANDY ONE-LINERS FOR SED (Unix stream editor) 整理：Eric Pement – 电邮：pemente[at]northpark[dot]edu 版本5.5 译者：Joe Hong – 电邮：hq00e[at]126[dot]com 在以下地址可找到本文档的最新（英文）版本： http://sed.sourceforge.net/sed1line.txt http://www.pement.org/sed/sed1line.txt 其他语言版本： 中文 – http://sed.sourceforge.net/sed1line_zh-CN.html 捷克语 – http://sed.sourceforge.net/sed1line_cz.html 荷语 – http://sed.sourceforge.net/sed1line_nl.html 法语 – http://sed.sourceforge.net/sed1line_fr.html 德语 – http://sed.sourceforge.net/sed1line_de.html 葡语 – http://sed.sourceforge.net/sed1line_pt-BR.html 文本间隔： ——– # 在每一行后面增加一空行 sed […] #!/usr/bin/python #filename:string.py import string print string.atoi(’13’,8) #这里转换8进制的数 print string.atoi(’13’,16) #这里转换成16进制的数 运行后的结果： 11 19 >>> import string >>> string.atoi(’13’,8) 11 >>> string.atoi(’13’,10) 13 >>> string.atoi(’13’) 13 >>>
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